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Additional Publications

Hansen lab


Post-translational modifications and lipid binding profile of insect cell-expressed full-length Mammalian synaptotagmin 1.
Vrljic M, Strop P, Hill RC, Hansen KC, Chu S, Brunger AT.
Biochemistry. 2011 Nov 22;50(46):9998-10012. Epub 2011 Oct 26.
PMID: 21928778

Lipocalin-1: a potential marker for noninvasive aneuploidy screening.
McReynolds S, Vanderlinden L, Stevens J, Hansen K, Schoolcraft WB, Katz-Jaffe MG.
Fertil Steril. 2011 Jun 30;95(8):2631-3. Epub 2011 Feb 16.
PMID: 21324447

Proteomic analyses of human plasma: Venus versus Mars.
Silliman CC, Dzieciatkowska M, Moore EE, Kelher MR, Banerjee A, Liang X, Land KJ, Hansen KC.
Transfusion. 2011 Aug 31. doi: 10.1111/j.1537-2995.2011.03316.x. [Epub ahead of print]
PMID: 21880043

Proteomic analysis of human mesenteric lymph.
Dzieciatkowska M, Wohlauer MV, Moore EE, Damle S, Peltz E, Campsen J, Kelher M, Silliman C, Banerjee A, Hansen KC.
Shock. 2011 Apr;35(4):331-8.
PMID:21192285

Proteomic profiling of the mesenteric lymph after hemorrhagic shock: Differential gel electrophoresis and mass spectrometry analysis.
Zurawel A, Moore EE, Peltz ED, Jordan JR, Damle S, Dzieciatkowska M, Banerjee A, Hansen KC.
Clin Proteomics. 2010 Nov 10;8(1):1.
PMID: 21906351

A kinase cascade leading to Rab11-FIP5 controls transcytosis of the polymeric immunoglobulin receptor.
Su T, Bryant DM, Luton F, Vergés M, Ulrich SM, Hansen KC, Datta A, Eastburn DJ, Burlingame AL, Shokat KM, Mostov KE.
Nat Cell Biol. 2010 Dec;12(12):1143-53. Epub 2010 Oct 31.
PMID:21037565

AKT regulates BRCA1 stability in response to hormone signaling.
Nelson AC, Lyons TR, Young CD, Hansen KC, Anderson SM, Holt JT.
Mol Cell Endocrinol. 2010 May 5;319(1-2):129-42. Epub 2010 Jan 18.
PMID:20085797

The neutrophil alloantigen HNA-3a (5b) is located on choline transporter-like protein 2 and appears to be encoded by an R>Q154 amino acid substitution.
Curtis BR, Cox NJ, Sullivan MJ, Konkashbaev A, Bowens K, Hansen K, Aster RH.
Blood. 2010 Mar 11;115(10):2073-6. Epub 2009 Dec 29.
PMID:20040764

Degradation of some polyubiquitinated proteins requires an intrinsic proteasomal binding element in the substrates.
Zhao M, Zhang NY, Zurawel A, Hansen KC, Liu CW.
J Biol Chem. 2010 Feb 12;285(7):4771-80. Epub 2009 Dec 10.
PMID:20007692

Proteome and system ontology of hemorrhagic shock: exploring early constitutive changes in postshock mesenteric lymph.
Peltz ED, Moore EE, Zurawel AA, Jordan JR, Damle SS, Redzic JS, Masuno T, Eun J, Hansen KC, Banerjee A.
Surgery. 2009 Aug;146(2):347-57. Epub 2009 Jun 25.
PMID:19628095

Effector activity of peanut allergens: a critical role for Ara h 2, Ara h 6, and their variants.
Porterfield HS, Murray KS, Schlichting DG, Chen X, Hansen KC, Duncan MW, Dreskin SC.
Clin Exp Allergy. 2009 Jul;39(7):1099-108. Epub 2009 May 11.
PMID:19438581

An in-solution ultrasonication-assisted digestion method for improved extracellular matrix proteome coverage.
Hansen KC, Kiemele L, Maller O, O'Brien J, Shankar A, Fornetti J, Schedin P.
Mol Cell Proteomics. 2009 Jul;8(7):1648-57. Epub 2009 Apr 7.
PMID:19351662

CBP/p300-mediated acetylation of histone H3 on lysine 56.
Das C, Lucia MS, Hansen KC, Tyler JK.
Nature. 2009 May 7;459(7243):113-7. Epub 2009 Mar 8. Erratum in: Nature. 2009 Aug 27;460(7259):1164.
PMID:19270680

Tamoxifen induces pleiotrophic changes in mammary stroma resulting in extracellular matrix that suppresses transformed phenotypes.
Hattar R, Maller O, McDaniel S, Hansen KC, Hedman KJ, Lyons TR, Lucia S, Wilson RS Jr, Schedin P.
Breast Cancer Res. 2009;11(1):R5. Epub 2009 Jan 27.
PMID:19173736

Alterations in the proteome of pulmonary alveolar type II cells in the rat after hepatic ischemia-reperfusion.
Hirsch J, Niemann CU, Hansen KC, Choi S, Su X, Frank JA, Fang X, Hirose R, Theodore P, Sapru A, Burlingame AL, Matthay MA.
Crit Care Med. 2008 Jun;36(6):1846-54.
PMID:18496381

Th2 cytokines act on S100/A11 to downregulate keratinocyte differentiation.
Howell MD, Fairchild HR, Kim BE, Bin L, Boguniewicz M, Redzic JS, Hansen KC, Leung DY.
J Invest Dermatol. 2008 Sep;128(9):2248-58. Epub 2008 Apr 3.
PMID:18385759

Gelsolin is depleted in post-shock mesenteric lymph.
Jordan JR, Moore EE, Damle SS, Eckels P, Johnson JL, Roach JP, Redzic JS, Hansen KC, Banerjee A.
J Surg Res. 2007 Nov;143(1):130-5.
PMID:17950082

Contribution of Ara h 2 to peanut-specific, immunoglobulin E-mediated, cell activation.
McDermott RA, Porterfield HS, El Mezayen R, Burks AW, Pons L, Schlichting DG, Solomon B, Redzic JS, Harbeck RJ, Duncan MW, Hansen KC, Dreskin SC.
Clin Exp Allergy. 2007 May;37(5):752-63.
PMID:17456223

Impact of low and high tidal volumes on the rat alveolar epithelial type II cell proteome.
Hirsch J, Hansen KC, Sapru A, Frank JA, Chalkley RJ, Fang X, Trinidad JC, Baker P, Burlingame AL, Matthay MA.
Am J Respir Crit Care Med. 2007 May 15;175(10):1006-13. Epub 2007 Mar 15.
PMID:17363773

Warm ischemia-induced alterations in oxidative and inflammatory proteins in hepatic Kupffer cells in rats.
Hirsch J, Hansen KC, Choi S, Noh J, Hirose R, Roberts JP, Matthay MA, Burlingame AL, Maher JJ, Niemann CU.
Mol Cell Proteomics. 2006 Jun;5(6):979-86. Epub 2006 Feb 24.
PMID:16500929

Bioinformatic methods to exploit mass spectrometric data for proteomic applications.
Chalkley RJ, Hansen KC, Baldwin MA.
Methods Enzymol. 2005;402:289-312.
PMID:16401513

Comprehensive analysis of a multidimensional liquid chromatography mass spectrometry dataset acquired on a quadrupole selecting, quadrupole collision cell, time-of-flight mass spectrometer: II. New developments in Protein Prospector allow for reliable and comprehensive automatic analysis of large datasets.
Chalkley RJ, Baker PR, Huang L, Hansen KC, Allen NP, Rexach M, Burlingame AL.
Mol Cell Proteomics. 2005 Aug;4(8):1194-204. Epub 2005 Jun 3.
PMID:15937296

Comprehensive analysis of a multidimensional liquid chromatography mass spectrometry dataset acquired on a quadrupole selecting, quadrupole collision cell, time-of-flight mass spectrometer: I. How much of the data is theoretically interpretable by search engines?
Chalkley RJ, Baker PR, Hansen KC, Medzihradszky KF, Allen NP, Rexach M, Burlingame AL.
Mol Cell Proteomics. 2005 Aug;4(8):1189-93. Epub 2005 May 27.
PMID:15923566

An unbiased cell morphology-based screen for new, biologically active small molecules.
Tanaka M, Bateman R, Rauh D, Vaisberg E, Ramachandani S, Zhang C, Hansen KC, Burlingame AL, Trautman JK, Shokat KM, Adams CL.
PLoS Biol. 2005 May;3(5):e128. Epub 2005 Apr 5.
PMID:15799708

Quantitative analysis of both protein expression and serine / threonine post-translational modifications through stable isotope labeling with dithiothreitol.
Vosseller K, Hansen KC, Chalkley RJ, Trinidad JC, Wells L, Hart GW, Burlingame AL.
Proteomics. 2005 Feb;5(2):388-98.
PMID:15648052

Conversion of a mechanosensitive channel protein from a membrane-embedded to a water-soluble form by covalent modification with amphiphiles.
Becker CF, Strop P, Bass RB, Hansen KC, Locher KP, Ren G, Yeager M, Rees DC, Kochendoerfer GG.
J Mol Biol. 2004 Oct 22;343(3):747-58.
PMID:15465059

Proteomics: current techniques and potential applications to lung disease.
Hirsch J, Hansen KC, Burlingame AL, Matthay MA.
Am J Physiol Lung Cell Mol Physiol. 2004 Jul;287(1):L1-23.
PMID:15187006

The urinary proteome in Fanconi syndrome implies specificity in the reabsorption of proteins by renal proximal tubule cells.
Cutillas PR, Chalkley RJ, Hansen KC, Cramer R, Norden AG, Waterfield MD, Burlingame AL, Unwin RJ.
Am J Physiol Renal Physiol. 2004 Sep;287(3):F353-64. Epub 2004 May 12.
PMID:15140760

Mass spectrometric analysis of protein mixtures at low levels using cleavable 13C-isotope-coded affinity tag and multidimensional chromatography.
Hansen KC, Schmitt-Ulms G, Chalkley RJ, Hirsch J, Baldwin MA, Burlingame AL.
Mol Cell Proteomics. 2003 May;2(5):299-314. Epub 2003 May 23.
PMID:12766231

A Method for Photoinitating Protein Folding in a nondenaturing environment (link: http://pubs.acs.org/doi/abs/10.1021/ja002949r)
Kirk C. Hansen Ronald S. Rock, Randy W. Larsen, and Sunney I. Chan. 
J Am Chem Soc 2000 Nov; 122(46):11567–11568
DOI: 10.1021/ja002949r

Rapid photochemical generation of ubiquinol through a radical pathway: an avenue for probing submillisecond enzyme kinetics.
Schultz BE, Hansen KC, Lin CC, Chan SI.
J Org Chem. 2000 May 19;65(10):3244-7.
PMID:10814227

Reaction of Escherichia coli cytochrome bo(3) and mitochondrial cytochrome bc(1) with a photoreleasable decylubiquinol.
Hansen KC, Schultz BE, Wang G, Chan SI.
Biochim Biophys Acta. 2000 Jan 10;1456(2-3):121-37.
PMID:10627300​